ClustEval
clustering evaluation framework
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Data Set 'brown' - General
brown
The data set contains pairwise similarities of blasted sequences of 232 proteins belonging to the amidohydrolase superfamily. A gold standard is provided describing families within the given superfamily. According to the gold standard the amidrohydrolase superfamily contains 29 families.
Publication: Shoshana D Brown, John A Gerlt, Jennifer L Seffernick, and Patricia C Babbitt. A gold standard set of mechanistically diverse enzyme superfamilies. Genome Biol, 7(1):R8, 2006. (Link)
| Information | Value |
|---|---|
| Alias | brown |
| Name | sfld/sfld_brown_et_al_amidohydrolases_protein_similarities_for_beh.txt |
| Description: | The data set contains pairwise similarities of blasted sequences of 232 proteins belonging to the amidohydrolase superfamily. A gold standard is provided describing families within the given superfamily. According to the gold standard the amidrohydrolase superfamily contains 29 families. |
| Publication: | Shoshana D Brown, John A Gerlt, Jennifer L Seffernick, and Patricia C Babbitt. A gold standard set of mechanistically diverse enzyme superfamilies. Genome Biol, 7(1):R8, 2006. |
| Dataset format | Rowwise Similarity |
| Download | Click (by downloading the dataset you accept the license presented below) |
| License | |
| First 10 lines |